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CF MB

Core Facilities Center for Medical Research Research Infrastructure OU Organizational units Medical University of Graz

Core Facility Molecular Biology

The Core Facility Molecular Biology (CF-MB) offers technologies, advice and guidance in the field of genomic and transcriptomic studies. We focus on 10x Genomics (single cell and in-situ-spatial transcriptomics) as well as Next Generation Sequencing (NGS) based applications (RNA sequencing and microbial community characterization). High-quality sample preparation with fully automated pipetting systems ensure standardized workflows for reproducible data.

The development of new protocols and methods is also part of our service and depends on our staff and lab resources.

Contact us for further information and to discuss your specific project needs!

Managing Directors

Birgit Gallé & Nina Schweintzger

T: +43 316 385 72828

T: +43 316 385 72830

E: birgit.galle(at)medunigraz.at; nina.schweintzger@medunigraz.at

CF MB

News

NEW! Xenium Protein Immunology subpanels are now available!
NEW! Lexogen QuantSeq 3‘ mRNA-Seq v2 Library Prep Kit with UDI is established!
NEW! Visium HD is now available!
10x FLEX protocol: scRNA Seq for FFPE and fixed material!
Bulk RNA Seqfrom FFPE material is established!

Save the dates:

24./25.09.2025: Cross-Plattform Synergy scRNAseq and Xenium Spatial transcriptomics (more information will follow)

02.10.2025: OLINK Lunch Seminar

10.11 - 13.11. 2025: Real-time PCR workshop

Thinking outside the box

Using our automated bulk RNA-Seq pipepline for investigating the feline transcriptome (in collaboration with the Centre for Clinical Veterinary Medicine, LMU Munich)
- Whole Blood RNA profiling of feline samples PLOS One

Analyzing miRNA with our Xenium Analyzer (a project of the University Hospital of the Paracelsus Medical University Salzburg)

Analyzing bacterial RNA with our Xenium Analyzer

CF MB

Cooperation partners

To perform 10x technologies a multidisciplinary team of experts is needed.

Core Facilities of the ZMF

Computational Bioanalytics
Flow Cytometry

Core Facility of Biomedical Research

Preclinical Imaging

Vienna BioCenter Core Facilities

Core Facility Next Generation Sequencing

CF MB

Automated pipelines

QiaSymphony: DNA/RNA extraction; 24 samples/run (3 x runs/day)
Biomek i7: NGS library preparation; 96 samples/run (min. 48 samples)
mRNA enriched bulk RNA Seq
rRNA depleted bulk RNA Seq
Metagenome